Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824242.1_cds_XP_016501802.1_15504
CDS Infomation

[gene=LOC107820100] [db_xref=GeneID:107820100] [protein=toll-like receptor 13] [protein_id=XP_016501802.1] [location=complement(join(29751..29863,29951..30472,31403..32012,32577..32794,32975..33129,34049..34218))] [gbkey=CDS]
Sequence

ATGGAAAGCCAACTGGTTGAGATGTGCATGGAATCGGCGACGCAGAGCCGTGACGCCGTC
GAAGCGTGGCGGAGACAGCGGCGGACTCTGGAAAGCATGCCATCTCACCTCGCCGAAGCT
CTTCTTCACCGCCTTCTTCGCCGCCGTCTCCTCTTCCCATCTTTGCTCGAAGTGTTTAAA
TTTTGTGTCGAGGAGATCGACTTGAGGGGGGAGAGCTGCGTGGATGCAGAATGGATGGCA
TATATAGGTGCTTTTGATCACTTGCGCTCTCTAAATTTATCAGATTGTAACAAAATTAAC
AATTCAGCCATTTGGGCAATTACAGGAATGACAAACTTAAAGGAGCTTGACCTCTCCAGA
TGCTCAAAGATCACTGACGCTGGAATTAGACATCTAACATCCATCCCAATTTTGGAAAAG
TTGTGGATTCCAGAAACAGGTGTCACAAATGATGGTGTGATACTCCTGTCTTCGTTAACT
AACTTGTCTGTGTTAGATTTGGGAGGCCTGCCTGTGTCTGATTTGGCTTTGGATAATCTT
AAGGTTCTCCGAAAGCTGCAACATTTGGATCTTTGGGGGAGTGAAGTATCAAACAAAGGA
GCATCTTATTTTAAATGGTTCCCAAGATTGAGTTCTCTGAATTTGGCCTGGACCAAGGTC
ACTATGTTGCCAAGTCTGCCTTCTCTTGCATGCCTAAATATGAGCAATTGCACGATACAT
TCTTCATTCGAAGGAGAAGGACGGAAAGCTCCCCTTGCAAAGCTTATTCTGTCTGGATCA
ACCATAAGAGATGTCTGTGAAGCTTTCCAACAACTTGAAACCTCCTCCCTCTCCCTCCTG
GATCTTTCCAATTCATCTCTTAATTCTTACTGCTTTTTGCCATATATGAGTGCTATATCA
GATTTAGATCTCAGTGGTACATCTGCAGGAGATGAGTCAGTTGAACACATTGCATTTATA
GGTCAAAATTTACGCCACCTAAATCTCAGCAGGACAAAGTTAAGCAATGCAGGACTGGAA
ATCTTAGCTGGTTTTGTTCCCAATCTTGAAACTTTATTATTATCTTACACAGCCATTGAC
GATTATGCTATCCCCTTTATGAGCACCATGCCTTCGTTAAAAAGTATCAATCTAAGTGGT
ACAAATATCAGAGGTGTGGTCAACGAGGCGGATTTTGATCCTAATTGCATTTCATCACTG
TCTGGGTTATGTAATCTTGATCATTTGGAGAGATTGGATTTGGAGGAGACTCGAATCAAG
GATTCAGCTTTGACTCCTTTGCCGAGCTTTCGTAAATTGAGTTATTTGTTTTTACGGAGT
GGTTCCCTTACTGATACCTCTTTGCATCAGCTGTCATCTATTAGAAGCTTGGTAACACTA
GGGATTCGTGACGGTGTGCTCACTAATGCTGGGCTCATCGTATTCAACCCTCCACCATCT
ATGAGAATTCTTGATCTCAGGGGTTGTTGGCTGCTGACAGAGGATGCACTGTTGTCATTT
CAGCAAAAGCATCGTCAAATTGAAGTAAGGCATGATCTTCTTAGTATTGCATTGGTCAAA
AAGTTATCTATTCACTCATCTTCATCGCAAGTGACATCACGGACCAAAATATACAAACAC
AAGCAAGGAGGGCCATCTTCATCTCCCCTTAGATCTAACAGAGGCAGTTTTCTTGATCAA
AGATTGAAGTACACCAGAGAAGAACTATTTGCACTGGGGTCCGCGTCTGCCCCTAATTCC
AGAGATAATGTTGATCTGATACCTCATGTGCTGGCAAATGATGGATAA

Peptide Sequence

PEP ID

XP_016501802.1
PEP Infomation

PREDICTED: toll-like receptor 13 [Nicotiana tabacum]
Sequence

MESQLVEMCMESATQSRDAVEAWRRQRRTLESMPSHLAEALLHRLLRRRLLFPSLLEVFK
FCVEEIDLRGESCVDAEWMAYIGAFDHLRSLNLSDCNKINNSAIWAITGMTNLKELDLSR
CSKITDAGIRHLTSIPILEKLWIPETGVTNDGVILLSSLTNLSVLDLGGLPVSDLALDNL
KVLRKLQHLDLWGSEVSNKGASYFKWFPRLSSLNLAWTKVTMLPSLPSLACLNMSNCTIH
SSFEGEGRKAPLAKLILSGSTIRDVCEAFQQLETSSLSLLDLSNSSLNSYCFLPYMSAIS
DLDLSGTSAGDESVEHIAFIGQNLRHLNLSRTKLSNAGLEILAGFVPNLETLLLSYTAID
DYAIPFMSTMPSLKSINLSGTNIRGVVNEADFDPNCISSLSGLCNLDHLERLDLEETRIK
DSALTPLPSFRKLSYLFLRSGSLTDTSLHQLSSIRSLVTLGIRDGVLTNAGLIVFNPPPS
MRILDLRGCWLLTEDALLSFQQKHRQIEVRHDLLSIALVKKLSIHSSSSQVTSRTKIYKH
KQGGPSSSPLRSNRGSFLDQRLKYTREELFALGSASAPNSRDNVDLIPHVLANDG

Transcript Sequence

Gene sequence data has not been registered.